Basic Information
Locus ID:
CH08.466
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 4921412 | 4923874 | - | CH08.466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.08 | 75,495.13 Da | 63.64 | 66.50 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 247 | 280 | 6.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 235 | 282 | 2.09E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 244 | 282 | 5.2E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 188 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039852935.1 | uncharacterized protein LOC120711465 isoform X1 [Panicum virgatum] | 3.04E-89 |
| TrEMBL | A0A835EHS0 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_041459 PE=4 SV=1 | 8.08E-94 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology