Basic Information
Locus ID:
CH08.2414
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 34316383 | 34326714 | - | CH08.2414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 181,183.50 Da | 59.06 | 70.27 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 956 | 1082 | 8.19287E-14 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 1457 | 1571 | 2.57119E-46 | - |
| CDD | cd14733 | BACK | 377 | 417 | 0.00324381 | - |
| CDD | cd00121 | MATH | 808 | 917 | 3.39827E-11 | IPR002083 |
| CDD | cd00121 | MATH | 1323 | 1442 | 1.27762E-17 | IPR002083 |
| CDD | cd00121 | MATH | 136 | 266 | 6.61587E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 1107 | 1198 | 9.1E-20 | IPR000210 |
| Pfam | PF00917 | MATH domain | 1340 | 1442 | 8.6E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 1464 | 1571 | 5.9E-26 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 293 | 389 | 4.0E-21 | IPR000210 |
| Pfam | PF00917 | MATH domain | 154 | 266 | 4.7E-5 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 800 | 922 | 7.68E-19 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 135 | 271 | 1.96E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 1450 | 1573 | 6.28E-30 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 1092 | 1199 | 8.97E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 1322 | 1445 | 2.94E-23 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 959 | 1088 | 1.08E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 283 | 395 | 6.59E-26 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1316 | 1446 | 2.9E-17 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 272 | 413 | 1.2E-33 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1447 | 1570 | 4.6E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 134 | 271 | 6.9E-22 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 799 | 922 | 1.9E-13 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1087 | 1231 | 5.0E-40 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 956 | 1086 | 1.5E-18 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 1575 | 1640 | 2.5E-14 | - |
| SMART | SM00061 | math_3 | 1324 | 1426 | 0.22 | IPR002083 |
| SMART | SM00061 | math_3 | 138 | 250 | 0.032 | IPR002083 |
| SMART | SM00225 | BTB_4 | 1108 | 1202 | 1.6E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 301 | 400 | 2.1E-17 | IPR000210 |
| SMART | SM00225 | BTB_4 | 1471 | 1575 | 1.8E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1108 | 1166 | 15.700684 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1471 | 1538 | 18.927074 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 952 | 1082 | 9.651752 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1311 | 1442 | 13.742872 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 134 | 266 | 15.200334 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 301 | 364 | 18.182524 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 791 | 917 | 11.134783 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 754 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1268 | 1304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 713 | 768 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 700 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 2.58E-57 |
| RefSeq | XP_025822101.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 7.08E-158 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 2.5E-56 | |
| TrEMBL | A0A1E5UZ32 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020832 PE=4 SV=1 | 1.24E-173 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology