Basic Information
Locus ID:
CH08.2399
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Transferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 34131008 | 34135578 | + | CH08.2399 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.07 | 64,579.48 Da | 46.65 | 80.79 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 12 | 58 | 1.5E-6 | IPR001810 |
| Pfam | PF02458 | Transferase family | 378 | 568 | 1.9E-27 | IPR003480 |
| SUPERFAMILY | SSF52047 | RNI-like | 101 | 175 | 1.39E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 59 | 3.53E-8 | IPR036047 |
| Gene3D | G3DSA:3.30.559.10 | - | 459 | 578 | 4.4E-16 | IPR023213 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 58 | 1.5E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 86 | 183 | 8.8E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.559.10 | - | 263 | 450 | 3.5E-25 | IPR023213 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 314 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17540.1 | HXXXD-type acyl-transferase family protein. | 2.5E-40 |
| RefSeq | XP_039832203.1 | benzyl alcohol O-benzoyltransferase-like [Panicum virgatum] | 4.75E-69 |
| Q8GT21 | Benzyl alcohol O-benzoyltransferase OS=Clarkia breweri OX=36903 PE=1 SV=1 | 1.41E-48 | |
| TrEMBL | A0A3L6RI22 | Putative F-box/LRR-repeat protein 22 OS=Panicum miliaceum OX=4540 GN=C2845_PM13G22880 PE=4 SV=1 | 2.15E-75 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH02.3531, AH08.564, BH02.3424, BH08.2212, BH08.597 ... |
| Poaceae | Eleusine coracana subsp. coracana | 15 | gene-QOZ80_1AG0007090, gene-QOZ80_1BG0050140 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0319820.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 11 | gene-QYE76_009231, gene-QYE76_009232, gene-QYE76_009233 ... |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0205788, Pt_Chr0205789, Pt_Chr0207610, Pt_Chr0207611 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G001670, Chr20G010470 |
| Poaceae | Thinopyrum elongatum | 5 | Tel3E01G785300, Tel6E01G283500, Tel7E01G327200 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC6AG018010 |
| Poaceae | Triticum aestivum | 5 | TraesCS3B02G537900.1, TraesCS3B02G538000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb386420_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-31300, nbis-gene-38896, nbis-gene-48553 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g11315, Zma_g15927 |