Basic Information
Locus ID:
CH08.2349
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 33704963 | 33707854 | + | CH08.2349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 92,848.97 Da | 48.52 | 85.46 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 287 | 347 | 2.5E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 561 | 772 | 1.7E-22 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 192 | 236 | 1.6E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 228 | 389 | 3.25E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 561 | 835 | 1.09E-40 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 525 | 632 | 2.7E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 633 | 861 | 8.9E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 400 | 1.0E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 557 | 840 | 22.039865 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 440 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 3.6E-132 |
| RefSeq | XP_004974851.1 | pollen receptor-like kinase 4 [Setaria italica] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 3.47E-131 | |
| TrEMBL | K3YMZ3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101781142 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology