Basic Information
Locus ID:
CH08.2205
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 32581676 | 32582935 | + | CH08.2205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 45,320.60 Da | 45.50 | 77.33 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 55 | 3.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 56 | 1.83E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 59 | 2.5E-7 | - |
| SMART | SM00256 | fbox_2 | 23 | 64 | 1.7E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 128 | 340 | 3.2E-15 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 56 | 9.126548 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822451.1 | uncharacterized protein LOC112898321 [Panicum hallii] | 2.35E-122 |
| TrEMBL | A0A5J9T1W2 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48522 PE=4 SV=1 | 2.6E-137 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology