Basic Information
Locus ID:
CH08.2192
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 32457664 | 32458923 | + | CH08.2192 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 46,771.92 Da | 59.34 | 77.97 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 10 | 43 | 2.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 44 | 5.23E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 47 | 5.9E-6 | - |
| SMART | SM00256 | fbox_2 | 10 | 54 | 4.4E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 102 | 321 | 6.7E-15 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822450.1 | F-box protein At3g07870-like [Panicum hallii] | 2.66E-111 |
| TrEMBL | A0A368RPY1 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G194100v2 PE=4 SV=1 | 9.35E-162 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology