Basic Information
Locus ID:
CH08.2133
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PMR5 N terminal Domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 31962813 | 31973132 | + | CH08.2133 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.07 | 106,019.81 Da | 54.58 | 88.70 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13839 | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 373 | 478 | 1.3E-8 | IPR026057 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 593 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039787692.1 | protein trichome birefringence-like 21 [Panicum virgatum] | 8.2E-44 |
| TrEMBL | A0A3L6RMK6 | Protein trichome birefringence-like 21 OS=Panicum miliaceum OX=4540 GN=C2845_PM11G27170 PE=3 SV=1 | 1.49E-43 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||