Basic Information
Locus ID:
CH08.1904
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 29631520 | 29637667 | - | CH08.1904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 89,098.67 Da | 46.83 | 88.05 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 191 | 230 | 1.9E-12 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 494 | 764 | 7.4E-44 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 281 | 341 | 1.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 191 | 352 | 1.81E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 475 | 765 | 4.99E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 370 | 3.6E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 567 | 5.2E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 568 | 780 | 1.3E-59 | - |
| SMART | SM00220 | serkin_6 | 491 | 764 | 4.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 491 | 774 | 35.170353 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 610 | 622 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 497 | 519 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 812 | 831 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 9.27E-202 |
| RefSeq | XP_004973571.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Setaria italica] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 8.91E-201 | |
| TrEMBL | A0A2T8IH65 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G218400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology