Basic Information
Locus ID:
CH08.1750
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DDE superfamily endonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 27663631 | 27667181 | + | CH08.1750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 99,588.05 Da | 48.87 | 59.97 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13359 | DDE superfamily endonuclease | 731 | 858 | 6.3E-11 | IPR027806 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 225 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43722.1 | 4.59E-32 | |
| RefSeq | XP_015628801.1 | uncharacterized protein LOC4332720 [Oryza sativa Japonica Group] | 7.51E-122 |
| TrEMBL | A0A3L6TQ14 | Myb_DNA-bind_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33420 PE=4 SV=1 | 4.19E-146 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||