Basic Information
Locus ID:
CH08.1431
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 23151547 | 23154591 | - | CH08.1431 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 103,177.15 Da | 39.93 | 103.81 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 513 | 571 | 1.8E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 680 | 903 | 2.5E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 6.0E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 78 | 135 | 3.8E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 963 | 1.64E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 60 | 289 | 3.92E-43 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 255 | 577 | 1.18E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 974 | 6.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 605 | 4.4E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 3.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 296 | 1.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 765 | 7.9E-17 | - |
| SMART | SM00220 | serkin_6 | 678 | 963 | 6.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 973 | 34.619125 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 535 | 548 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 514 | 527 | 4.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 1.46E-117 |
| RefSeq | XP_034598975.1 | receptor-like protein kinase HSL1 [Setaria viridis] | 1.51E-259 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 1.42E-116 | |
| TrEMBL | A0A1E5VCL0 | Receptor-like protein kinase HSL1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016226 PE=3 SV=1 | 1.09E-261 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology