Basic Information
Locus ID:
CH08.1274
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 20486319 | 20489689 | - | CH08.1274 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 80,458.76 Da | 39.43 | 87.42 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 356 | 392 | 2.86251E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 356 | 392 | 5.7E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 44 | 78 | 1.0E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 467 | 731 | 9.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 466 | 737 | 4.86E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 355 | 395 | 9.57E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 312 | 399 | 2.0E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 539 | 4.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 540 | 744 | 1.2E-51 | - |
| SMART | SM00220 | serkin_6 | 465 | 734 | 1.4E-33 | IPR000719 |
| SMART | SM00181 | egf_5 | 301 | 355 | 43.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 359 | 399 | 0.01 | IPR000742 |
| SMART | SM00179 | egfca_6 | 356 | 399 | 8.8E-8 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 465 | 734 | 37.290451 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 356 | 399 | 10.646597 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 471 | 492 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 374 | 385 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 584 | 596 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 356 | 383 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 5.39E-97 |
| RefSeq | XP_039853753.1 | wall-associated receptor kinase 1-like [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 5.23E-96 | |
| TrEMBL | A0A8T0RDN4 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG139100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology