Basic Information
Locus ID:
CH08.1241
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
metal ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 19203990 | 19213536 | + | CH08.1241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 117,994.21 Da | 46.30 | 50.45 | -1.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 577 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 167 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039814493.1 | uncharacterized protein LOC120677406 isoform X2 [Panicum virgatum] | 4.44E-206 |
| TrEMBL | A0A8T0QYK6 | DNMT1-RFD domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG232100 PE=4 SV=1 | 7.45E-217 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||