Basic Information
Locus ID:
CH08.1238
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 19068204 | 19079293 | + | CH08.1238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 134,417.05 Da | 54.80 | 82.45 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 426 | 788 | 6.7E-27 | IPR019557 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 878 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 48 | - | - |
| Coils | Coil | Coil | 239 | 259 | - | - |
| Coils | Coil | Coil | 1101 | 1135 | - | - |
| Coils | Coil | Coil | 1143 | 1163 | - | - |
| Coils | Coil | Coil | 192 | 219 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004973205.1 | uncharacterized protein LOC101768714 [Setaria italica] | 1.31E-136 |
| TrEMBL | B8BFQ9 | PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 | 8.77E-222 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||