Basic Information
Locus ID:
CH08.1208
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 18261448 | 18265821 | + | CH08.1208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 73,287.84 Da | 49.22 | 87.11 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 341 | 635 | 1.19166E-122 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 310 | 621 | 9.0E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 341 | 647 | 6.47E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 344 | 639 | 1.6E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 103 | - | - |
| Coils | Coil | Coil | 272 | 292 | - | - |
| Coils | Coil | Coil | 220 | 240 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 3.01E-256 |
| RefSeq | XP_025822609.1 | probable galacturonosyltransferase 4 isoform X1 [Panicum hallii] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 2.89E-255 | |
| TrEMBL | A0A2T7D636 | Hexosyltransferase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G136400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology