Basic Information
Locus ID:
CH08.1108
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 15174272 | 15180301 | - | CH08.1108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.54 | 47,881.17 Da | 91.88 | 88.64 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 272 | 382 | 2.94E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 169 | 235 | 2.75E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 404 | 9.9E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 178 | 229 | 9.5E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 138 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974567.1 | putative F-box/LRR-repeat protein 22 [Setaria italica] | 8.42E-88 |
| TrEMBL | A0A368RK51 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G103000v2 PE=4 SV=1 | 1.9E-86 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||