Basic Information
Locus ID:
CH07.939
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 8874959 | 8878275 | - | CH07.939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 112,929.36 Da | 34.13 | 93.99 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 699 | 1007 | 1.14132E-84 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 695 | 1007 | 3.2E-37 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 533 | 546 | 0.89 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 225 | 282 | 7.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 297 | 355 | 2.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 72 | 3.1E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 99 | 113 | 0.45 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 356 | 5.44E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 614 | 2.01E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 673 | 1007 | 3.42E-66 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 622 | 3.2E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 295 | 3.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 787 | 1.2E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 193 | 2.4E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 809 | 1028 | 5.8E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 577 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 223 | 246 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 1008 | 1.6E-21 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 532 | 554 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 1008 | 36.188 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 855 | 867 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 699 | 721 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 101 | 114 | 3.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 3.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 4.32E-83 |
| RefSeq | XP_004954582.1 | receptor-like protein kinase 5 [Setaria italica] | 6.42E-283 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 6.63E-63 | |
| TrEMBL | K3YPL1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101755460 PE=3 SV=1 | 1.45E-281 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology