HalophFGD

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Basic Information
Locus ID: CH07.921
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH07 8667501 8668949 - CH07.921
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.81 43,141.43 Da 61.30 89.49 -0.54
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 81 172 - -
MobiDBLite mobidb-lite consensus disorder prediction 52 172 - -
Coils Coil Coil 303 330 - -
Coils Coil Coil 338 358 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL B8BCB5 C3H1-type domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29829 PE=4 SV=1 8.95E-103
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 45 AH01.1738, AH01.1924, AH02.1406, AH02.1839, AH04.1107 ...
AH04.2291, AH05.1513, AH05.207, AH05.2637, AH06.104, AH08.1514, BH01.746, BH02.1865, BH04.1204, BH04.727, BH04.944, BH05.2107, BH05.3460, BH07.224, BH09.342, BH09.988, CH01.2970, CH01.4685, CH02.1861, CH03.2041, CH03.3265, CH04.2574, CH04.496, CH05.2592, CH05.3232, CH06.1542, CH06.747, CH07.2475, CH07.3213, CH07.921, CH08.1220, CH08.1238, CH08.1267, CH08.1830, CH08.2703, CH08.422, CH09.1881, CH09.996, Contig2112.1, Contig2139.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.