Basic Information
Locus ID:
CH07.860
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 7778108 | 7783888 | - | CH07.860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 68,414.47 Da | 36.59 | 96.57 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 131 | 190 | 4.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 304 | 572 | 9.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 3.9E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 205 | 2.27E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 574 | 4.72E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 221 | 2.5E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 588 | 8.4E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 274 | 377 | 2.3E-33 | - |
| SMART | SM00220 | serkin_6 | 303 | 580 | 2.0E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 580 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 330 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 6.61E-206 |
| RefSeq | XP_025799128.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Panicum hallii] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 6.36E-205 | |
| TrEMBL | A0A2S3GMZ1 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G101200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology