Basic Information
Locus ID:
CH07.708
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 5914750 | 5919814 | + | CH07.708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 99,133.61 Da | 52.75 | 77.07 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 231 | 333 | 1.2E-4 | IPR013187 |
| Pfam | PF00646 | F-box domain | 40 | 77 | 1.4E-5 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 143 | 550 | 2.48E-6 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 78 | 7.33E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 40 | 79 | 6.5E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 129 | 343 | 1.7E-23 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 588 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051221058.1 | F-box protein At3g07870-like [Lolium perenne] | 3.01E-59 |
| TrEMBL | A0A835DUF7 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_065718 PE=4 SV=1 | 1.06E-114 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology