Basic Information
Locus ID:
CH07.547
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 4361307 | 4373853 | - | CH07.547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 131,342.38 Da | 55.81 | 82.36 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 3.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 536 | 782 | 4.6E-33 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 74 | 2.7E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 782 | 3.84E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 241 | 5.29E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 261 | 1.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 476 | 584 | 4.4E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 586 | 799 | 6.3E-49 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 123 | 146 | 7.026593 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 508 | 785 | 29.361277 | IPR000719 |
| PRINTS | PR01217 | Proline rich extensin signature | 272 | 288 | 2.4E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 253 | 265 | 2.4E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 438 | 463 | 2.4E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 420 | 437 | 2.4E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1036 | 1050 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 957 | 1089 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1035 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 995 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 980 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1051 | 1072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 393 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 1.99E-148 |
| RefSeq | XP_039788382.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like [Panicum virgatum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 1.93E-147 | |
| TrEMBL | A0A8T0X043 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG070900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology