Basic Information
Locus ID:
CH07.470
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 3740706 | 3741764 | - | CH07.470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 36,716.35 Da | 94.42 | 36.51 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 291 | 341 | 2.3E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 295 | 346 | 5.2E-6 | IPR013083 |
| SMART | SM00184 | ring_2 | 21 | 118 | 2.8 | IPR001841 |
| SMART | SM00184 | ring_2 | 297 | 334 | 2.4E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 297 | 334 | 9.59769 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 147 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039849991.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 9.77E-11 |
| TrEMBL | A0A8T0SYK3 | Zinc finger (C3HC4-type RING finger) family protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG534400 PE=4 SV=1 | 3.18E-9 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||