Basic Information
Locus ID:
CH07.455
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 3604167 | 3610361 | + | CH07.455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 80,173.86 Da | 45.65 | 77.15 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 641 | 3.78632E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 358 | 559 | 1.2E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 639 | 3.91E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 655 | 1.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 431 | 8.9E-34 | - |
| SMART | SM00220 | serkin_6 | 356 | 639 | 7.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 626 | 36.089062 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 127 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 1.56E-136 |
| RefSeq | XP_025811326.1 | cold-responsive protein kinase 1-like isoform X1 [Panicum hallii] | 3.01E-221 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 1.5E-135 | |
| TrEMBL | A0A2T8KU02 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G047500 PE=3 SV=1 | 6.8E-220 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH07.455.