Basic Information
Locus ID:
CH07.3889
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 45375993 | 45378168 | + | CH07.3889 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 34,280.78 Da | 43.29 | 78.39 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 186 | 304 | 3.8E-20 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 99 | 305 | 7.1E-79 | - |
| SMART | SM00702 | p4hc | 106 | 304 | 1.2E-68 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 182 | 305 | 11.888206 | IPR005123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 92 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 9.43E-150 |
| RefSeq | XP_034577994.1 | probable prolyl 4-hydroxylase 3 [Setaria viridis] | 2.13E-206 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 9.05E-149 | |
| TrEMBL | A0A4U6WHN2 | Fe2OG dioxygenase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G381400v2 PE=4 SV=1 | 4.83E-205 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology