Basic Information
Locus ID:
CH07.3620
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 43280213 | 43281328 | - | CH07.3620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 40,079.32 Da | 69.39 | 80.54 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 92 | 350 | 2.91061E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 94 | 350 | 9.8E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 362 | 2.83E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 88 | 172 | 3.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 362 | 3.1E-48 | - |
| SMART | SM00220 | serkin_6 | 93 | 350 | 2.9E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 350 | 46.237274 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 206 | 218 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 122 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51660.1 | mitogen-activated protein kinase kinase 4. Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 5.57E-138 |
| RefSeq | XP_039776959.1 | mitogen-activated protein kinase kinase 5-like [Panicum virgatum] | 1.42E-231 |
| O80397 | Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1 | 5.35E-137 | |
| TrEMBL | A0A8T0XB56 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG518500 PE=3 SV=1 | 3.46E-230 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology