Basic Information
Locus ID:
CH07.3515
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function, DUF573
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 42368562 | 42369539 | - | CH07.3515 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 35,975.84 Da | 73.84 | 50.86 | -1.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04504 | Protein of unknown function, DUF573 | 151 | 238 | 1.4E-18 | IPR007592 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 102 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61730.1 | DNA-binding storekeeper protein-related transcriptional regulator. | 7.13E-9 |
| RefSeq | XP_004954058.2 | uncharacterized protein LOC101755591 [Setaria italica] | 6.13E-85 |
| Q9SYA9 | Probable transcription factor At1g61730 OS=Arabidopsis thaliana OX=3702 GN=At1g61730 PE=1 SV=1 | 7.07E-8 | |
| TrEMBL | K3YU51 | Mediator of RNA polymerase II transcription subunit 30 OS=Setaria italica OX=4555 GN=SETIT_1G334900v2 PE=3 SV=1 | 6.91E-85 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology