Basic Information
Locus ID:
CH07.3506
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 42278187 | 42283788 | + | CH07.3506 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 37,221.85 Da | 59.48 | 89.76 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 99 | 245 | 1.2E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 90 | 281 | 1.01E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 180 | 311 | 1.2E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 179 | 3.1E-20 | - |
| SMART | SM00220 | serkin_6 | 98 | 326 | 9.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 98 | 337 | 24.004492 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 104 | 126 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08500.1 | MAPK/ERK kinase kinase 1. Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. | 1.8E-46 |
| RefSeq | XP_015689485.1 | mitogen-activated protein kinase kinase kinase 1-like [Oryza brachyantha] | 1.11E-68 |
| Q39008 | Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MEKK1 PE=1 SV=2 | 1.77E-45 | |
| TrEMBL | A0A1E5W7D4 | Mitogen-activated protein kinase kinase kinase 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005853 PE=4 SV=1 | 2.75E-127 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB04g055450.2N |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3625, BH07.3436, CH07.3506 |
| Poaceae | Oryza coarctata | 1 | Oco03G022830 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g53030.1 |