Basic Information
Locus ID:
CH07.3380
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 41070035 | 41072114 | - | CH07.3380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 13,006.80 Da | 47.10 | 96.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 8 | 95 | 3.57541E-47 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 102 | 1.7E-38 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 98 | 1.76E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 5.5E-43 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 107 | 1.6E-45 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 76 | 10.396963 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 2.34E-46 |
| RefSeq | NP_001132156.1 | Membrane-anchored ubiquitin-fold protein 3 [Zea mays] | 1.56E-77 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 1.05E-66 | |
| TrEMBL | A0A1E5VQ86 | Membrane-anchored ubiquitin-fold protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011722 PE=4 SV=1 | 3.21E-76 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology