HalophFGD

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Basic Information
Locus ID: CH07.3213
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
CH07 39763893 39767657 + CH07.3213
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.56 28,538.42 Da 51.34 79.35 -0.62
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 29 65 - -
MobiDBLite mobidb-lite consensus disorder prediction 106 127 - -
Coils Coil Coil 166 193 - -
Coils Coil Coil 134 154 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL B8BCB4 Nucleotide exchange factor GrpE OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29828 PE=4 SV=1 1.59E-70
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 45 AH01.1738, AH01.1924, AH02.1406, AH02.1839, AH04.1107 ...
AH04.2291, AH05.1513, AH05.207, AH05.2637, AH06.104, AH08.1514, BH01.746, BH02.1865, BH04.1204, BH04.727, BH04.944, BH05.2107, BH05.3460, BH07.224, BH09.342, BH09.988, CH01.2970, CH01.4685, CH02.1861, CH03.2041, CH03.3265, CH04.2574, CH04.496, CH05.2592, CH05.3232, CH06.1542, CH06.747, CH07.2475, CH07.3213, CH07.921, CH08.1220, CH08.1238, CH08.1267, CH08.1830, CH08.2703, CH08.422, CH09.1881, CH09.996, Contig2112.1, Contig2139.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.