Basic Information
Locus ID:
CH07.28
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 299300 | 304754 | - | CH07.28 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 140,703.78 Da | 44.98 | 82.95 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 273 | 658 | 3.6466E-152 | - |
| CDD | cd01490 | Ube1_repeat2 | 690 | 1229 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 275 | 651 | 2.6E-27 | IPR000594 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 448 | 518 | 3.7E-26 | IPR032418 |
| Pfam | PF00899 | ThiF family | 671 | 1170 | 1.6E-72 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 858 | 1111 | 2.3E-84 | IPR019572 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 520 | 589 | 2.0E-22 | IPR032420 |
| Pfam | PF09358 | Ubiquitin fold domain | 1182 | 1271 | 4.1E-23 | IPR018965 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 268 | 656 | 1.7E-98 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 666 | 1166 | 1.31E-129 | IPR035985 |
| Gene3D | G3DSA:1.10.10.2660 | - | 843 | 1118 | 1.8E-192 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 436 | 517 | 5.0E-112 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 265 | 382 | 1.2E-35 | IPR042449 |
| Gene3D | G3DSA:3.40.50.720 | - | 691 | 1170 | 1.8E-192 | - |
| Gene3D | G3DSA:3.10.290.60 | - | 1184 | 1274 | 2.1E-21 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 393 | 681 | 5.0E-112 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 1149 | 1271 | 8.6E-47 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 268 | 1276 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 633 | 641 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 850 | 858 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 919 | 946 | 2.9E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 718 | 741 | 2.9E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 295 | 319 | 2.9E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 410 | 437 | 2.9E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 765 | 790 | 2.9E-63 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_025802919.1 | ubiquitin-activating enzyme E1 3 isoform X1 [Panicum hallii] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6TCZ7 | E1 ubiquitin-activating enzyme OS=Panicum miliaceum OX=4540 GN=C2845_PM03G17100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology