Basic Information
Locus ID:
CH07.27
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 293618 | 296157 | - | CH07.27 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 55,251.32 Da | 62.66 | 79.29 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 236 | 383 | 1.4E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 206 | 472 | 1.88E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 389 | 483 | 1.9E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 200 | 304 | 6.3E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 388 | 1.9E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 222 | 478 | 10.351048 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 126 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 3.84E-123 |
| RefSeq | XP_034580032.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 [Setaria viridis] | 3.75E-264 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 3.71E-122 | |
| TrEMBL | A0A4U6WFK7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G454700v2 PE=4 SV=1 | 8.49E-263 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology