Basic Information
Locus ID:
CH07.250
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 2021249 | 2028472 | - | CH07.250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 108,016.96 Da | 53.70 | 81.66 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 150 | 249 | 2.90321E-12 | - |
| CDD | cd00159 | RhoGAP | 310 | 449 | 2.62974E-32 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 729 | 809 | 4.9E-22 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 310 | 454 | 2.4E-30 | IPR000198 |
| Pfam | PF00169 | PH domain | 149 | 253 | 2.3E-12 | IPR001849 |
| SUPERFAMILY | SSF50729 | PH domain-like | 148 | 253 | 2.41E-17 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 310 | 504 | 1.0E-32 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 142 | 255 | 1.3E-16 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 280 | 503 | 2.9E-41 | IPR008936 |
| SMART | SM00324 | RhoGAP_3 | 307 | 498 | 8.2E-25 | IPR000198 |
| SMART | SM00233 | PH_update | 148 | 256 | 1.0E-15 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 301 | 501 | 30.008038 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 147 | 254 | 15.4807 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 660 | 681 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 909 | - | - |
| Coils | Coil | Coil | 719 | 753 | - | - |
| Coils | Coil | Coil | 933 | 953 | - | - |
| Coils | Coil | Coil | 778 | 812 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958565.1 | rho GTPase-activating protein 7 isoform X3 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL6 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology