HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: CH07.2333
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH07 31801145 31803999 + CH07.2333
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.74 51,398.85 Da 55.77 76.34 -0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 25 43 - -
MobiDBLite mobidb-lite consensus disorder prediction 459 479 - -
MobiDBLite mobidb-lite consensus disorder prediction 461 479 - -
MobiDBLite mobidb-lite consensus disorder prediction 59 86 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 149 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039839805.1 uncharacterized protein LOC120699792 [Panicum virgatum] 3.68E-18
TrEMBL A0A1Z5S908 Secreted protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G311601 PE=4 SV=1 4.88E-24
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 AH07.317, BH02.3187, BH07.414, CH07.2333
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.