halophFGD

Basic Information

Locus ID: CH07.2238

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Diphthamide biosynthesis protein 1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH07	30914256	30922703	+	CH07.2238

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.49	110,716.98 Da	68.59	69.40	-0.58

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01866	Putative diphthamide synthesis protein	714	966	6.1E-59	IPR016435
Pfam	PF02567	Phenazine biosynthesis-like protein	82	134	2.8E-16	IPR003719
SUPERFAMILY	SSF54506	Diaminopimelate epimerase-like	79	134	4.71E-14	-
Gene3D	G3DSA:3.40.50.11840	Diphthamide synthesis DPH1/DPH2 domain 1	714	766	8.6E-56	IPR042263
Gene3D	G3DSA:3.40.50.11860	Diphthamide synthesis DPH1/DPH2 domain 3	888	966	8.6E-56	IPR042265
Gene3D	G3DSA:3.10.310.10	Diaminopimelate Epimerase; Chain A, domain 1	77	151	2.4E-17	-
Gene3D	G3DSA:3.40.50.11850	Diphthamide synthesis DPH1/DPH2 domain 2	769	887	8.6E-56	IPR042264
TIGRFAM	TIGR00322	diphth2_R: diphthamide biosynthesis enzyme Dph1/Dph2 domain	713	966	2.3E-54	IPR016435
MobiDBLite	mobidb-lite	consensus disorder prediction	483	523	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	71	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	385	415	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	569	605	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	17	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	540	689	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	606	624	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	540	562	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	237	254	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	178	198	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	234	276	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	492	514	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	35	54	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	137	163	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	132	206	-	-
SFLD	SFLDS00032	Radical SAM 3-amino-3-carboxypropyl Radical Forming	695	966	0.0	IPR016435

Gene Ontology

Biological Process:

GO:0009058 (biosynthetic process)

Molecular Function:

GO:0003824 (catalytic activity)

KEGG Pathway

KO Term:

K07561 (2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108])

Reaction:

R10455 (S-Adenosyl-L-methionine + L-Histidine-[translation elongation factor 2] <=> 5'-Methylthioadenosine + Peptide 2-(3-carboxy-3-aminopropyl)-L-histidine)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G62030.1	diphthamide synthesis DPH2 family protein.	9.36E-71
RefSeq	XP_034577846.1	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 isoform X4 [Setaria viridis]	1.48E-111
Swiss-Prot	Q9BZG8	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 OS=Homo sapiens OX=9606 GN=DPH1 PE=1 SV=3	1.46E-58
TrEMBL	A0A4U6WIV5	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 OS=Setaria viridis OX=4556 GN=SEVIR_1G370700v2 PE=3 SV=1	3.34E-110

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	BH03.906, BH08.88, CH04.2195, CH07.1127, CH07.2238, CH08.729