Basic Information
Locus ID:
CH07.2029
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 28880027 | 28881940 | - | CH07.2029 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 59,568.48 Da | 60.90 | 65.81 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 167 | 255 | 1.1E-5 | IPR013187 |
| Pfam | PF00646 | F-box domain | 19 | 55 | 5.9E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 55 | 1.16E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 57 | 2.6E-6 | - |
| SMART | SM00256 | fbox_2 | 22 | 62 | 0.0018 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 104 | 275 | 1.7E-15 | IPR017451 |
| Coils | Coil | Coil | 546 | 546 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020160314.1 | putative F-box protein At5g52610 [Aegilops tauschii subsp. strangulata] | 2.14E-44 |
| TrEMBL | A0A835FGJ5 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_012297 PE=4 SV=1 | 2.31E-90 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology