Basic Information
Locus ID:
CH07.2012
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 28673726 | 28676214 | + | CH07.2012 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 56,050.21 Da | 41.39 | 87.16 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 190 | 456 | 2.05699E-106 | - |
| Pfam | PF00069 | Protein kinase domain | 185 | 451 | 6.5E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 458 | 1.12E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 165 | 259 | 3.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 466 | 1.4E-59 | - |
| SMART | SM00220 | serkin_6 | 184 | 448 | 3.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 463 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 306 | 318 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 190 | 212 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 503 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 6.29E-182 |
| RefSeq | XP_025799101.1 | probable serine/threonine-protein kinase At1g01540 [Panicum hallii] | 2.82E-307 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 6.04E-181 | |
| TrEMBL | A0A3L6QFD5 | Putative serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM12G16450 PE=4 SV=1 | 6.37E-306 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology