Basic Information
Locus ID:
CH07.199
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 1628841 | 1632858 | - | CH07.199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 59,200.80 Da | 37.44 | 111.22 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 443 | 8.1E-60 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 147 | 198 | 1.1E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 25 | 449 | 5.0E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 99 | 113 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 154 | 164 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 114 | 122 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 85 | 96 | 2.1E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 3.68E-288 |
| RefSeq | XP_004958612.1 | sodium/hydrogen exchanger 2 [Setaria italica] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZS57 | Sodium/hydrogen exchanger OS=Setaria italica OX=4555 GN=101784391 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology