Basic Information
Locus ID:
CH07.1843
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 26846813 | 26852386 | + | CH07.1843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 100,493.44 Da | 60.50 | 85.54 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 428 | 869 | 6.3E-217 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 428 | 862 | 1.25E-48 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 460 | 864 | 2.9E-11 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22510.1 | alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | 2.83E-307 |
| RefSeq | XP_039843475.1 | neutral/alkaline invertase 3, chloroplastic [Panicum virgatum] | 0 |
| Q6H6N5 | Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7F748 | Alkaline/neutral invertase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G248100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology