Basic Information
Locus ID:
CH07.1838
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 26806326 | 26811839 | - | CH07.1838 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 86,586.69 Da | 51.72 | 81.60 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 535 | 783 | 2.1828E-131 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 530 | 783 | 1.5E-71 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 188 | 392 | 3.1E-67 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 505 | 783 | 1.89E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 608 | 793 | 9.4E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 522 | 607 | 5.6E-37 | - |
| SMART | SM00220 | serkin_6 | 529 | 787 | 2.0E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 529 | 787 | 46.067665 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 650 | 662 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 535 | 556 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 691 | 701 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 754 | 776 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 710 | 732 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 603 | 616 | 3.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 644 | 662 | 3.9E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 1.03E-282 |
| RefSeq | XP_034601443.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Setaria viridis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 9.86E-282 | |
| TrEMBL | A0A4U6W9T2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G181300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology