Basic Information
Locus ID:
CH07.167
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 1395021 | 1398276 | - | CH07.167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 39,153.90 Da | 42.49 | 82.20 | 0.05 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56440.2 | - | 1.67E-9 |
| RefSeq | XP_040382279.1 | autophagy-related protein 18a-like [Oryza brachyantha] | 4.26E-21 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 4.66E-8 | |
| TrEMBL | A0A4U6W1W0 | WD_REPEATS_REGION domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G438500v2 PE=4 SV=1 | 8.91E-29 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH07.2345, BH03.4349, BH03.4350, CH07.167 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_3AG0244420, gene-QOZ80_3BG0283610 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G137700 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr24G012750 |