Basic Information
Locus ID:
CH07.149
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ulp1 protease family, C-terminal catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH07 | 1268694 | 1272343 | - | CH07.149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.90 | 55,900.64 Da | 73.43 | 80.99 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 297 | 478 | 3.6E-39 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 249 | 482 | 1.18E-62 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 249 | 482 | 6.8E-70 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 282 | 454 | 25.819454 | IPR003653 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 69 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15880.1 | Cysteine proteinases superfamily protein. EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. | 1.72E-89 |
| RefSeq | XP_025804187.1 | sentrin-specific protease 1-like [Panicum hallii] | 1.38E-207 |
| Q94F30 | Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana OX=3702 GN=ESD4 PE=1 SV=1 | 1.66E-88 | |
| TrEMBL | A0A1E5UN52 | Ubiquitin-like-specific protease ESD4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024766 PE=3 SV=1 | 1.55E-206 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12418, jg28038 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18789 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah020904 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59915, Sbi_jg62852 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg24000 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00027803 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl03394, Sgl08511 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015734, gene:ENSEOMG00000029214 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0016070, CQ.Regalona.r1.3BG0016930 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30234380 |
| Apiaceae | Apium graveolens | 2 | Ag1G01965, Ag5G02415 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G001850, COCNU_04G009910, scaffold072761G000010 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103715291, gene-LOC103723468, gene-LOC120108284 ... |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.2122.V1.1, AsparagusV1_05.939.V1.1 ... |
| Asteraceae | Flaveria trinervia | 3 | Ftri13G26646, Ftri14G07701, Ftri3G30311 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT3G06910.1, AT4G00690.1, AT4G15880.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10005561m.g.v1.0, Thhalv10020659m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp3g05860.v2.2, Sp7g06040.v2.2, Sp7g14290.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g031520.2N, BniB01g056890.2N, BniB02g073660.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq09G1139, Ceq09G1160 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1237 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g06160 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0260s00004.v1.0, Dusal.0591s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g08840 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4157 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1303 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011094, Pov_00019227 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G37588, Lb5G27282, Lb5G29146 |
| Poaceae | Echinochloa crus-galli | 9 | AH01.3670, AH02.1647, AH03.4032, BH01.4022, BH02.1674 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0016400, gene-QOZ80_1BG0065300 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0113550.1, HORVU.MOREX.r3.3HG0260990.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_014937, gene-QYE76_038833, gene-QYE76_052925 ... |
| Poaceae | Oryza coarctata | 5 | Oco01G010020, Oco02G010420, Oco05G013290, Oco06G013130 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os01g25370.1, LOC_Os03g22400.1, LOC_Os03g29630.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G357800, gene-BS78_02G386400 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0102705, Pt_Chr0305204, Pt_Chr0305247, Pt_Chr0603555 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr04G011250, Chr05G013930, Chr07G010610, Chr08G008020 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G242600, Tel3E01G338800, Tel4E01G252300 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG013650, gene_TRIDC2BG016480 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G112900.2, TraesCS2B02G131700.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb016540_P004, Zm00001eb111330_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-1597, nbis-gene-36632 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g1218, Zma_g26618, Zma_g5765, Zma_g7947 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG16.1502, evm.TU.LG26.164 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g11630 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.582, evm.TU.Scaffold_6_RagTag.603 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-1384, nbisL1-mrna-16087 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15893, nbisL1-mrna-21341 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-495, nbisL1-mrna-6294 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.348, evm.TU.utg000019l.862 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007212, Maker00012691 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12199, nbisL1-mrna-13729 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18185, nbisL1-mrna-3640 |
| Salicaceae | Populus euphratica | 4 | populus_peu08052, populus_peu19229, populus_peu22212 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132604532, gene-LOC132626795 |
| Solanaceae | Solanum chilense | 2 | SOLCI002390400, SOLCI005286800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005305, gene-LOC107009948 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9425 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1629 |
| Zosteraceae | Zostera marina | 2 | Zosma02g02970.v3.1, Zosma02g18390.v3.1 |