Basic Information
Locus ID:
CH06.822
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the iron ascorbate-dependent oxidoreductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 7097945 | 7100876 | - | CH06.822 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.34 | 50,373.63 Da | 74.18 | 69.76 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 294 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025811057.1 | DIBOA-glucoside dioxygenase BX6-like [Panicum hallii] | 2.85E-13 |
| Q84TC2 | DIBOA-glucoside dioxygenase BX6 OS=Zea mays OX=4577 GN=BX6 PE=1 SV=1 | 8.69E-11 | |
| TrEMBL | A0A3L6TLR1 | 1-aminocyclopropane-1-carboxylate oxidase-like protein 2 OS=Panicum miliaceum OX=4540 GN=C2845_PM01G39730 PE=4 SV=1 | 6.94E-13 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_14G002950 |
| Brassicaceae | Brassica nigra | 1 | BniB01g044820.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00007702 |
| Poaceae | Echinochloa crus-galli | 4 | CH01.1911, CH06.2806, CH06.3125, CH06.822 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr11G005110 |
| Zosteraceae | Zostera marina | 5 | Zosma02g12200.v3.1, Zosma02g12590.v3.1, Zosma03g11790.v3.1 ... |