Basic Information
Locus ID:
CH06.82
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 665260 | 668922 | - | CH06.82 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 67,871.40 Da | 40.90 | 83.67 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 56 | 1.9E-10 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 218 | 314 | 1.2E-7 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 67 | 6.8E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 58 | 1.6E-10 | - |
| SMART | SM00256 | fbox_2 | 21 | 61 | 1.6E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 111 | 332 | 2.7E-26 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 62 | 11.246099 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040246438.1 | F-box protein At3g07870 isoform X4 [Aegilops tauschii subsp. strangulata] | 4.47E-178 |
| TrEMBL | A0A835AMG7 | FBA_3 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_056483 PE=4 SV=1 | 1.11E-226 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology