HalophFGD

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Basic Information
Locus ID: CH06.747
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH06 6230436 6239016 - CH06.747
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.53 96,212.16 Da 61.92 84.47 -0.46
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 297 339 - -
MobiDBLite mobidb-lite consensus disorder prediction 689 709 - -
MobiDBLite mobidb-lite consensus disorder prediction 297 317 - -
MobiDBLite mobidb-lite consensus disorder prediction 378 401 - -
MobiDBLite mobidb-lite consensus disorder prediction 375 401 - -
Coils Coil Coil 757 777 - -
Coils Coil Coil 539 573 - -
Coils Coil Coil 718 738 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL B8BFQ9 PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 1.29E-198
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 45 AH01.1738, AH01.1924, AH02.1406, AH02.1839, AH04.1107 ...
AH04.2291, AH05.1513, AH05.207, AH05.2637, AH06.104, AH08.1514, BH01.746, BH02.1865, BH04.1204, BH04.727, BH04.944, BH05.2107, BH05.3460, BH07.224, BH09.342, BH09.988, CH01.2970, CH01.4685, CH02.1861, CH03.2041, CH03.3265, CH04.2574, CH04.496, CH05.2592, CH05.3232, CH06.1542, CH06.747, CH07.2475, CH07.3213, CH07.921, CH08.1220, CH08.1238, CH08.1267, CH08.1830, CH08.2703, CH08.422, CH09.1881, CH09.996, Contig2112.1, Contig2139.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.