Basic Information
Locus ID:
CH06.680
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 5654547 | 5659909 | - | CH06.680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 115,501.50 Da | 66.00 | 66.62 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 19 | 157 | 3.19838E-64 | - |
| Pfam | PF00582 | Universal stress protein family | 20 | 133 | 1.5E-8 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 462 | 717 | 6.0E-39 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 143 | 1.34E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 437 | 718 | 2.46E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 138 | 2.1E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 735 | 1.4E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 530 | 5.0E-25 | - |
| SMART | SM00220 | serkin_6 | 458 | 722 | 7.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 458 | 722 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 577 | 589 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 955 | 991 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1033 | 1060 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 883 | 906 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 799 | 815 | - | - |
| Coils | Coil | Coil | 384 | 429 | - | - |
| Coils | Coil | Coil | 324 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 1.97E-261 |
| RefSeq | XP_004964592.1 | U-box domain-containing protein 35 isoform X2 [Setaria italica] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 3.14E-106 | |
| TrEMBL | A0A368QR26 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_4G043200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology