Basic Information
Locus ID:
CH06.502
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 4094473 | 4095555 | - | CH06.502 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 37,153.50 Da | 44.51 | 87.03 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 132 | 175 | 3.89503E-18 | - |
| Pfam | PF13639 | Ring finger domain | 132 | 175 | 8.1E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 126 | 179 | 7.61E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 180 | 2.3E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 133 | 174 | 1.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 133 | 175 | 12.238477 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 360 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 4.77E-71 |
| RefSeq | XP_034592274.1 | RING-H2 finger protein ATL47-like [Setaria viridis] | 2.29E-175 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 4.61E-70 | |
| TrEMBL | A0A3L6PEW5 | RING-type domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM10G03770 PE=4 SV=1 | 8.49E-180 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology