halophFGD

Basic Information

Locus ID: CH06.432

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH06	3525602	3527046	-	CH06.432

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.87	45,557.63 Da	55.30	69.91	-0.45

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00651	BTB/POZ domain	127	223	2.6E-18	IPR000210
SUPERFAMILY	SSF54695	POZ domain	125	224	1.63E-21	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	124	228	3.9E-26	IPR011333
SMART	SM00225	BTB_4	133	241	7.5E-15	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	133	202	17.189787	IPR000210
MobiDBLite	mobidb-lite	consensus disorder prediction	238	287	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	90	112	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	257	271	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.	3.01E-23
RefSeq	XP_004966738.1	BTB/POZ and MATH domain-containing protein 1 [Setaria italica]	8.77E-48
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1	2.96E-22
TrEMBL	A0A1E5W7F1	BTB/POZ and MATH domain-containing protein 2 (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005651 PE=4 SV=1	3.67E-56

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for CH06.432.