HalophFGD

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Basic Information
Locus ID: CH06.349
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
CH06 2838281 2841464 + CH06.349
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.73 60,503.37 Da 67.71 88.28 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 450 507 1.5E-11 IPR005174
SUPERFAMILY SSF81383 F-box domain 272 317 2.62E-6 IPR036047
Gene3D G3DSA:1.20.1280.50 - 280 321 7.7E-7 -
Gene3D G3DSA:1.20.58.340 Magnesium transport protein CorA, transmembrane region 45 158 1.7E-17 -
MobiDBLite mobidb-lite consensus disorder prediction 169 199 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G19640.1 magnesium transporter 4. Transmembrane magnesium transporter. One of nine family members. 2.11E-17
RefSeq XP_025813273.1 uncharacterized protein LOC112890635 [Panicum hallii] 1.53E-114
Swiss-Prot Q01JR9 Putative magnesium transporter MRS2-D OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-D PE=3 SV=1 3.76E-18
TrEMBL A0A2S3HLT9 DUF295 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G326800 PE=4 SV=1 3.47E-113
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 1 AsparagusV1_06.303.V1.1
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno06g06340
Poaceae Echinochloa crus-galli 62 AH01.2961, AH01.2962, AH03.2991, AH03.2992, AH03.3030 ...
AH04.1576, AH05.1260, AH05.2628, AH05.2629, AH06.1134, AH06.251, AH08.1288, AH08.1298, AH08.1299, BH03.3160, BH03.3161, BH04.1588, BH04.1926, BH04.1933, BH04.1984, BH05.1435, BH05.2714, BH06.1163, BH06.354, BH06.357, BH06.466, BH06.496, BH06.500, BH07.1563, BH07.555, BH08.1269, BH08.1273, BH08.1282, BH08.1283, BH08.1285, BH08.1462, BH08.202, BH08.203, CH01.3529, CH01.4766, CH02.2378, CH02.2921, CH03.3352, CH03.3353, CH03.3356, CH03.3400, CH03.3401, CH04.1395, CH04.1816, CH04.2264, CH05.1623, CH06.1289, CH06.345, CH06.347, CH06.349, CH07.2334, CH08.1391, CH08.1395, CH08.1396, CH08.1695, CH08.245, Contig942_2.4
Poaceae Eleusine coracana subsp. coracana 42 gene-QOZ80_1AG0008090, gene-QOZ80_1BG0056840 ...
gene-QOZ80_2AG0102190, gene-QOZ80_2AG0125690, gene-QOZ80_2AG0131900, gene-QOZ80_2BG0155550, gene-QOZ80_2BG0181430, gene-QOZ80_2BG0187360, gene-QOZ80_4AG0318260, gene-QOZ80_5AG0379330, gene-QOZ80_5AG0379340, gene-QOZ80_5AG0408020, gene-QOZ80_5BG0426350, gene-QOZ80_5BG0426360, gene-QOZ80_5BG0456320, gene-QOZ80_6BG0468750, gene-QOZ80_7AG0567180, gene-QOZ80_7BG0599050, gene-QOZ80_8AG0627680, gene-QOZ80_8AG0627730, gene-QOZ80_8BG0656360, gene-QOZ80_8BG0656440, gene-QOZ80_9AG0672650, gene-QOZ80_9AG0680860, gene-QOZ80_9AG0688340, gene-QOZ80_9AG0688350, gene-QOZ80_9AG0688360, gene-QOZ80_9AG0688450, gene-QOZ80_9AG0688470, gene-QOZ80_9AG0688500, gene-QOZ80_9AG0688510, gene-QOZ80_9AG0689230, gene-QOZ80_9AG0689990, gene-QOZ80_9BG0696260, gene-QOZ80_9BG0698850, gene-QOZ80_9BG0714830, gene-QOZ80_9BG0716650, gene-QOZ80_9BG0716660, gene-QOZ80_9BG0716710, gene-QOZ80_9BG0716720, gene-QOZ80_9BG0716730, gene-QOZ80_9BG0716740
Poaceae Hordeum vulgare 14 HORVU.MOREX.r3.1HG0013960.1.CDS1 ...
HORVU.MOREX.r3.1HG0088350.1.CDS1, HORVU.MOREX.r3.1HG0088370.1.CDS1, HORVU.MOREX.r3.1HG0088410.1.CDS1, HORVU.MOREX.r3.1HG0091090.1.CDS1, HORVU.MOREX.r3.2HG0121790.1.CDS1, HORVU.MOREX.r3.3HG0233570.1.CDS1, HORVU.MOREX.r3.3HG0290980.1.CDS1, HORVU.MOREX.r3.4HG0341240.1.CDS1, HORVU.MOREX.r3.4HG0392220.1.CDS1, HORVU.MOREX.r3.7HG0650240.1.CDS1, HORVU.MOREX.r3.7HG0739250.1.CDS1, HORVU.MOREX.r3.7HG0748200.1, HORVU.MOREX.r3.7HG0751100.1.CDS1
Poaceae Lolium multiflorum 43 gene-QYE76_001105, gene-QYE76_002874, gene-QYE76_004422 ...
gene-QYE76_006338, gene-QYE76_006339, gene-QYE76_009128, gene-QYE76_015424, gene-QYE76_015455, gene-QYE76_015458, gene-QYE76_015460, gene-QYE76_017209, gene-QYE76_017733, gene-QYE76_024147, gene-QYE76_027874, gene-QYE76_027875, gene-QYE76_027877, gene-QYE76_027879, gene-QYE76_027880, gene-QYE76_027885, gene-QYE76_027886, gene-QYE76_027890, gene-QYE76_027891, gene-QYE76_027892, gene-QYE76_028860, gene-QYE76_029151, gene-QYE76_036415, gene-QYE76_037416, gene-QYE76_044045, gene-QYE76_048574, gene-QYE76_048593, gene-QYE76_048597, gene-QYE76_057062, gene-QYE76_057456, gene-QYE76_060961, gene-QYE76_061723, gene-QYE76_063929, gene-QYE76_063930, gene-QYE76_065879, gene-QYE76_065882, gene-QYE76_065906, gene-QYE76_065907, gene-QYE76_068439, gene-QYE76_071793
Poaceae Oryza coarctata 20 Oco01G011840, Oco02G012080, Oco02G023020, Oco03G002810 ...
Oco03G002880, Oco03G019200, Oco04G002800, Oco04G019970, Oco09G007730, Oco11G002280, Oco12G002270, Oco21G001360, Oco21G008040, Oco22G009230, Oco22G009930, Oco22G009940, Oco22G010060, Oco23G002050, Oco23G009450, Oco24G009160
Poaceae Oryza sativa 22 LOC_Os02g03660.1, LOC_Os02g06470.1, LOC_Os02g47490.1 ...
LOC_Os06g05560.1, LOC_Os06g05580.1, LOC_Os06g05590.1, LOC_Os06g05600.1, LOC_Os06g05610.1, LOC_Os06g05620.1, LOC_Os06g20420.1, LOC_Os07g04790.1, LOC_Os08g31690.1, LOC_Os11g05580.1, LOC_Os11g05590.1, LOC_Os11g40790.1, LOC_Os11g40800.1, LOC_Os12g05960.1, LOC_Os12g05970.1, LOC_Os12g39460.1, LOC_Os12g39520.1, LOC_Os12g40140.1, LOC_Os12g40290.1
Poaceae Paspalum vaginatum 25 gene-BS78_02G278400, gene-BS78_03G305100, gene-BS78_K091100 ...
gene-BS78_04G238400, gene-BS78_05G015800, gene-BS78_05G015900, gene-BS78_05G016300, gene-BS78_05G016500, gene-BS78_05G016700, gene-BS78_05G016900, gene-BS78_05G209200, gene-BS78_06G023500, gene-BS78_06G033200, gene-BS78_07G119900, gene-BS78_07G210400, gene-BS78_07G230800, gene-BS78_10G041800, gene-BS78_10G041900, gene-BS78_10G042000, gene-BS78_10G042100, gene-BS78_10G042200, gene-BS78_10G042400, gene-BS78_10G052100, gene-BS78_10G056000, gene-BS78_10G099600
Poaceae Puccinellia tenuiflora 19 Pt_Chr0101782, Pt_Chr0200394, Pt_Chr0201388, Pt_Chr0204406 ...
Pt_Chr0204407, Pt_Chr0204408, Pt_Chr0205964, Pt_Chr0205965, Pt_Chr0206830, Pt_Chr0306919, Pt_Chr0306928, Pt_Chr0402206, Pt_Chr0402208, Pt_Chr0504565, Pt_Chr0605590, Pt_Chr0700834, Pt_Chr0702111, Pt_Chr0702129, Pt_Ctg00241
Poaceae Sporobolus alterniflorus 17 Chr04G021030, Chr04G021040, Chr06G022640, Chr06G022650 ...
Chr11G022960, Chr16G004930, Chr16G015360, Chr17G004370, Chr20G007700, Chr24G007440, Chr24G007980, Chr28G007330, Chr28G007340, Chr29G007120, Chr29G007140, Chr31G001130, Chr31G004450
Poaceae Thinopyrum elongatum 30 Tel1E01G080200, Tel1E01G650900, Tel1E01G651000 ...
Tel1E01G651100, Tel1E01G651200, Tel1E01G651300, Tel1E01G651400, Tel1E01G651600, Tel1E01G651700, Tel1E01G651800, Tel1E01G653100, Tel1E01G655000, Tel1E01G655100, Tel1E01G686400, Tel2E01G589100, Tel3E01G145300, Tel3E01G489200, Tel6E01G188000, Tel7E01G195700, Tel7E01G197700, Tel7E01G198000, Tel7E01G199900, Tel7E01G200000, Tel7E01G200400, Tel7E01G200900, Tel7E01G201300, Tel7E01G344800, Tel7E01G345000, Tel7E01G345100, Tel7E01G384700
Poaceae Triticum dicoccoides 21 gene_TRIDC1AG058710, gene_TRIDC1AG058730 ...
gene_TRIDC1AG058770, gene_TRIDC1AG058780, gene_TRIDC1AG058840, gene_TRIDC1BG067580, gene_TRIDC1BG067600, gene_TRIDC1BG067610, gene_TRIDC1BG067630, gene_TRIDC1BG067640, gene_TRIDC1BG067660, gene_TRIDC1BG067740, gene_TRIDC3AG044370, gene_TRIDC3BG050280, gene_TRIDC4AG057300, gene_TRIDC4AG057470, gene_TRIDC4AG057610, gene_TRIDC4BG010960, gene_TRIDC6BG050920, gene_TRIDC7BG013690, gene_TRIDC7BG074230
Poaceae Triticum aestivum 99 TraesCS1A02G036800.1, TraesCS1A02G398500.1 ...
TraesCS1A02G398600.1, TraesCS1A02G398900.1, TraesCS1A02G399000.1, TraesCS1A02G399100.1.cds1, TraesCS1A02G399200.1.cds1, TraesCS1A02G399300.1, TraesCS1A02G414800.1.cds1, TraesCS1B02G082800.1.cds1, TraesCS1B02G426400.1, TraesCS1B02G426500.1.cds1, TraesCS1B02G426600.1.cds1, TraesCS1B02G426700.1, TraesCS1B02G426800.1.cds1, TraesCS1B02G426900.1.cds1, TraesCS1B02G427000.1.cds1, TraesCS1B02G427100.1.cds1, TraesCS1B02G427200.1.cds1, TraesCS1B02G427300.1.cds1, TraesCS1B02G428100.1.cds1, TraesCS1B02G444800.1.cds1, TraesCS1D02G038400.1, TraesCS1D02G038500.1.cds1, TraesCS1D02G038600.1, TraesCS1D02G038700.1, TraesCS1D02G068200.1.cds1, TraesCS1D02G294100.1.cds1, TraesCS1D02G294200.1.cds1, TraesCS1D02G406100.1.cds1, TraesCS1D02G406200.1.cds1, TraesCS1D02G406300.1, TraesCS1D02G406400.1.cds1, TraesCS1D02G406500.1.cds1, TraesCS1D02G406600.1.cds1, TraesCS1D02G406700.1, TraesCS1D02G406800.1.cds1, TraesCS1D02G407700.1.cds1, TraesCS1D02G422200.1, TraesCS1D02G422500.1.cds1, TraesCS2A02G154200.1.cds1, TraesCS2B02G357000.1.cds1, TraesCS2B02G391300.1.cds1, TraesCS2B02G413700.1.cds1, TraesCS2D02G159700.1, TraesCS2D02G393300.1.cds1, TraesCS3A02G090800.1, TraesCS3B02G046600.1, TraesCS3B02G095800.1.cds1, TraesCS3B02G105800.1, TraesCS3B02G334000.1.cds1, TraesCS3D02G042400.1.cds1, TraesCS3D02G090800.1.cds1, TraesCS3D02G299400.1.cds1, TraesCS4A02G395200.1.cds1, TraesCS4A02G395300.1.cds1, TraesCS4A02G396000.1.cds1, TraesCS4A02G396100.1.cds1, TraesCS4A02G397100.1, TraesCS4A02G397200.1.cds1, TraesCS4A02G397300.1, TraesCS4A02G397600.1, TraesCS4A02G398000.1, TraesCS4A02G398200.1, TraesCS4B02G100200.1.cds1, TraesCS4D02G070100.1.cds1, TraesCS6A02G024800.1.cds1, TraesCS6B02G114500.1, TraesCS6B02G312400.1.cds1, TraesCS6D02G076300.1, TraesCS7A02G096000.1.cds1, TraesCS7A02G114900.1, TraesCS7A02G186000.1, TraesCS7A02G212400.1.cds1, TraesCS7A02G553400.1, TraesCS7B02G012300.1, TraesCS7B02G090300.1.cds1, TraesCS7B02G092000.1.cds1, TraesCS7B02G092100.1.cds1, TraesCS7B02G485200.1.cds1, TraesCS7D02G091000.1.cds1, TraesCS7D02G091800.1.cds1, TraesCS7D02G091900.1.cds1, TraesCS7D02G092000.1, TraesCS7D02G093300.1, TraesCS7D02G093400.1.cds1, TraesCS7D02G093500.1.cds1, TraesCS7D02G093800.1, TraesCS7D02G093900.1.cds1, TraesCS7D02G094100.1, TraesCS7D02G094200.1, TraesCS7D02G186700.1.cds1, TraesCS7D02G187800.1.cds1, TraesCS7D02G187900.1.cds1, TraesCS7D02G437100.1.cds1, TraesCS7D02G539900.1.cds1, TraesCS7D02G540100.1.cds1, TraesCSU02G228700.1.cds1, TraesCSU02G248000.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-34724, nbis-gene-43222, nbis-gene-50379 ...
nbis-gene-57051
Poaceae Zoysia macrostachya 4 Zma_g22868, Zma_g23978, Zma_g29106, Zma_g29492
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