Basic Information
Locus ID:
CH06.3128
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 37233871 | 37237641 | + | CH06.3128 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 105,970.95 Da | 44.07 | 100.45 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 127 | 142 | 0.25 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 72 | 1.9E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 179 | 235 | 2.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 711 | 987 | 8.8E-40 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 587 | 601 | 0.38 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 371 | 628 | 1.19E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 987 | 1.18E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 425 | 1.57E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 637 | 5.5E-91 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 323 | 2.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 240 | 4.8E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 146 | 1.3E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 684 | 786 | 1.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1001 | 5.4E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 274 | 297 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 321 | 6.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 490 | 513 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 143 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 347 | 371 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 708 | 987 | 7.6E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 988 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 1.44E-141 |
| RefSeq | XP_004966471.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Setaria italica] | 1.69E-283 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 2.21E-247 | |
| TrEMBL | K3XV02 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101763793 PE=3 SV=1 | 3.82E-282 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology