Basic Information
Locus ID:
CH06.2806
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 34791289 | 34792928 | - | CH06.2806 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.71 | 38,540.02 Da | 85.07 | 48.11 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 354 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A5J9UW18 | Uncharacterized protein OS=Eragrostis curvula OX=38414 GN=EJB05_29827 PE=4 SV=1 | 2.48E-19 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_14G002950 |
| Brassicaceae | Brassica nigra | 1 | BniB01g044820.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00007702 |
| Poaceae | Echinochloa crus-galli | 4 | CH01.1911, CH06.2806, CH06.3125, CH06.822 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr11G005110 |
| Zosteraceae | Zostera marina | 5 | Zosma02g12200.v3.1, Zosma02g12590.v3.1, Zosma03g11790.v3.1 ... |