Basic Information
Locus ID:
CH06.2709
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 33926210 | 33927361 | - | CH06.2709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 32,271.64 Da | 47.20 | 92.83 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 107 | 220 | 3.5892E-48 | - |
| CDD | cd00121 | MATH | 18 | 83 | 0.00138212 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 109 | 220 | 3.2E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 96 | 220 | 7.46E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 87 | 1.8E-5 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 223 | 289 | 1.5E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 94 | 217 | 8.1E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 118 | 223 | 2.5E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 118 | 180 | 17.189787 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 2.07E-58 |
| RefSeq | XP_039844400.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 5.12E-143 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 2.01E-57 | |
| TrEMBL | A0A1E5ULY1 | BTB/POZ and MATH domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0025099 PE=4 SV=1 | 6.81E-148 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology